MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0001151MEGA[All Projects] Feedbackpublic2019-03-14 22:192019-03-22 08:19
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusresolvedResolutionno change required 
PlatformOSOS Version
Product Version 
Target VersionFixed in Version 
First NameMelanie
Last NameWeckert
Emailmweckert@csu.edu.au
Confirm Emailmweckert@csu.edu.au
Summary0001151: Error message
Description
Using Mega7:

"Expecting sequence' .....,' but found . (in line 67)'

I could not find anything wrong with the sequence. There is no '.'

Thanks,

Melanie
Steps To Reproduce
Additional Information
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Issue History
Date ModifiedUsernameFieldChange
2019-03-14 22:19guestNew Issue
2019-03-21 14:26gstecherAssigned To => gstecher
2019-03-21 14:26gstecherStatusnew => assigned
2019-03-21 14:26gstecherNote Added: 0004215
2019-03-22 08:19gstecherNote Added: 0004220
2019-03-22 08:19gstecherStatusassigned => resolved
2019-03-22 08:19gstecherResolutionopen => no change required

Notes
(0004215)
gstecher   
2019-03-21 14:26   
Hi Melanie,

I am writing in response to the bug report you recently submitted regarding the MEGA software. If you can send me the data file that leads to the error, then I can see what is causing the error.

--
Best regards,
Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu
(0004220)
gstecher   
2019-03-22 08:19   
Hi Melanie,

The error occurs because the sequence name 'JN906022_Rhizoscyphus_ericae' is used twice so MEGA tries to parse the file as interleaved. You can solve the issue by giving each sequence a unique name.
On 3/21/2019 10:33 PM, Melanie Weckert wrote:
>
> Thanks Glen,
>
> When I try to open the .meg file in Phylogeny, I get the error message.
>
> Cheers,
>
> Melanie
>
>
>
> Dr. Melanie Weckert,
>
> Visiting Senior Research Scientist (Plant Pathology/Soil Microbiology),
>
> New South Wales Department of Primary Industries
>
> NSW, Australia.
>
> T: 0447219991
>
> E: melanie.weckert@dpi.nsw.gov.au