MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0000151MEGA[All Projects] Feedbackpublic2016-05-09 07:092016-05-09 07:09
Reporterguest 
Assigned To 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusnewResolutionopen 
PlatformOSOS Version
Product Version 
Target VersionFixed in Version 
First NameChristelle
Last NameVangenot
Emailchristelle.vangenot@unige.ch
Confirm Emailchristelle.vangenot@unige.ch
Summary0000151: Test of selection
DescriptionHi,
I thought that the test for selection was to be applied either :
 * on interspecific data in which case you have to provide a sequence per species
 * on intraspecific data and in this last case you have to give the frequencies of the sequences (I guess repeat the sequences that are observed several times)
However in the example (http://www.megasoftware.net/web_help_7/helpfile.htm#hc_first_time_user.htm [^]) for testing selection, you just give 3 alleles of HLA-A locus. did I misunderstood?

Thx
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2016-05-09 07:09guestNew Issue

Notes
(0000042)
gstecher   
1969-12-31 17:33   
I would imagine that we would want backwards compatibility with MEGA 2 .tre files in the latest version of MEGA.
(0000053)
Nikita Vikhrev   
1969-12-31 17:33   
You can use a *.mts file to retrieve MEGA2 tree into MEGA3. The backward compatibility is guaranteed by the mts format.
(0000061)
gstecher   
1969-12-31 17:33   
Ok, this makes sense. We should put something in the documentation to inform people about this.