MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0001714MEGAAlignment Explorerpublic2020-01-16 03:012020-01-17 08:04
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusassignedResolutionopen 
PlatformMacOSOS XOS Version10.10
Product Version 
Target VersionFixed in Version 
First NameLino
Last NameOmetto
Emaillino.ometto@unipv.it
Confirm Emaillino.ometto@unipv.it
Summary0001714: Alignment editing is very slow
DescriptionWhen trying to modify a large alignment (>100 seqs, around 1000 bp long) in MegaX each edit (e.g. gap insertion) takes a lot of time (in the order of few seconds). The same kind of editing (using the same input file) is very fast when using Mega7.

Also: in MegaX the output file of "save file using only highlighted sites (e.g. 4 fold degenerate sites)" actually corresponds to the entire alignment. I have tried using different output formats, changing to "only not highlighted sites" and checking the "3rd-codon only" option, but the results do not change.
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Date ModifiedUsernameFieldChange
2020-01-16 03:01guestNew Issue
2020-01-17 08:04gstecherAssigned To => gstecher
2020-01-17 08:04gstecherStatusnew => assigned

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