MantisBT - MEGA
View Issue Details
IDProjectCategoryView StatusDate SubmittedLast Update
0002027MEGA[All Projects] Feedbackpublic2020-06-02 09:032020-06-02 11:07
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusresolvedResolutionno change required 
PlatformOSOS Version
Product VersionMEGA-CC 11 (command line version) 
Target VersionFixed in Version 
First NameZeping
Last NameQu
Emailzeping.qu@mail.utoronto.ca
Confirm Emailzeping.qu@mail.utoronto.ca
Summary0002027: Possibility of using .gbk files as input for MEGA
DescriptionHello MEGA team,

As the summary describes, I am hoping to know if there would be a way to compare genomes with MEGA using .gbk files.

Thanks!
Steps To Reproduce
Additional Information
TagsNo tags attached.
Relationships
Attached Files
Issue History
Date ModifiedUsernameFieldChange
1969-12-31 17:33user19Note Added: 0001818
1969-12-31 17:33user19Statusnew => acknowledged
1969-12-31 17:33user19Note Added: 0001903
1969-12-31 17:33user19Statusacknowledged => resolved
1969-12-31 17:33user19Resolutionopen => fixed
1969-12-31 17:33user19Assigned To => user19
2020-06-02 09:03guestNew Issue
2020-06-02 11:00gstecherNote Deleted: 0001818
2020-06-02 11:00gstecherNote Deleted: 0001903
2020-06-02 11:07gstecherNote Added: 0004467
2020-06-02 11:07gstecherStatusnew => resolved
2020-06-02 11:07gstecherResolutionopen => no change required
2020-06-02 11:07gstecherAssigned To => gstecher

Notes
(0004467)
gstecher   
2020-06-02 11:07   
Hi Zeping,

I am writing in response to your question regarding the MEGA software. No, currently MEGA does not parse .gbk files. However, virtually all genomic data sources will export data in the FASTA format which MEGA can parse.

--
Best regards,
Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu