MantisBT - MEGA |
| View Issue Details |
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| ID | Project | Category | View Status | Date Submitted | Last Update |
| 0002361 | MEGA | Calculation Error | public | 2020-11-16 09:52 | 2021-01-05 19:01 |
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| Reporter | guest | |
| Assigned To | gstecher | |
| Priority | normal | Severity | minor | Reproducibility | have not tried |
| Status | resolved | Resolution | no change required | |
| Platform | PC | OS | Linux | OS Version | Debian |
| Product Version | MEGA-CC 11 (command line version) | |
| Target Version | | Fixed in Version | | |
| First Name | Dylan |
| Last Name | Akhawais |
| Email | dylan.akhawais@kcl.ac.uk |
| Confirm Email | dylan.akhawais@kcl.ac.uk |
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| Summary | 0002361: MEGA CC does not use all threads available and set |
| Description | Hi, I am running a ML phylogeny tree using MEGA CC on an Ubuntu server with 96 threads. I have set the thread count to 96 when creating the MAO file and verified it's there in the MAO file however when I run the tree, I can only see 1 thread being used. Occasionally, it uses 6 threads but quickly returns back to 1 thread.
Is this normal functionality or a bug? Is there a maximum thread count of 6 regardless of how many I have on the machine? |
| Steps To Reproduce | Construct a HKY+G phylogeny tree using Bootstrap method and 1000 replications, with other settings at default. Using a taxa file of 1751 sequences previously aligned by MEGA. |
| Additional Information | |
| Tags | No tags attached. |
| Relationships | |
| Attached Files | |
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| Issue History |
| Date Modified | Username | Field | Change |
| 2020-11-16 09:52 | guest | New Issue | |
| 2021-01-05 19:01 | gstecher | Note Added: 0004543 | |
| 2021-01-05 19:01 | gstecher | Status | new => resolved |
| 2021-01-05 19:01 | gstecher | Resolution | open => no change required |
| 2021-01-05 19:01 | gstecher | Assigned To | => gstecher |