MantisBT - MEGA
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0000257MEGA[All Projects] Feedbackpublic2016-09-19 06:452016-09-20 12:52
guest 
gstecher 
normalminorhave not tried
resolvedno change required 
MEGA 11 (Graphical Interface version) 
 
Weiyang
Chen
weiyangchen@yeah.net
weiyangchen@yeah.net
0000257: align by clustalW(codons)
Dear Sir/Madam,
I am a user of mega7.0. It is wonderful software. There are some options when aligning multiple sequences. I wonder what is the difference between ‘align by clustalW’ and ‘align by clustalW(codons)’.
I look forward to hearing from you soon.
Sincerely,
Weiyang Chen, Ph.D.

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Issue History
2016-09-19 06:45guestNew Issue
2016-09-20 12:52gstecherNote Added: 0003701
2016-09-20 12:52gstecherStatusnew => resolved
2016-09-20 12:52gstecherResolutionopen => no change required
2016-09-20 12:52gstecherAssigned To => gstecher

Notes
(0003701)
gstecher   
2016-09-20 12:52   
Hi Weiyang,

I am writing in response to your question regarding the MEGA software. When aligning by codons, the data is first translated to amino acids, aligned, then untranslated. The regular alignment option just aligns by nucleotides.

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Best regards,

Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu