MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0002693MEGA[All Projects] Feedbackpublic2021-03-30 00:282021-04-02 07:42
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusresolvedResolutionno change required 
PlatformOSOS Version
Product VersionMEGA Website 
Target VersionFixed in Version 
First NameRashid
Last NameRamazanzadeh
Emailatrop_t51@yahoo.com
Confirm Emailatrop_t51@yahoo.com
Summary0002693: Mega x
DescriptionDear Sir/Madam
I am doing project with MEGA X software. Unfortunately it is too slow in alignment. How I can speed up for alignment.
I am looking forward to hearing from you soon
Best regards
Rashid
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Issue History
Date ModifiedUsernameFieldChange
1969-12-31 17:33Nikita VikhrevNote Added: 0002106
1969-12-31 17:33Nikita VikhrevStatusnew => closed
1969-12-31 17:33Nikita VikhrevResolutionopen => won't fix
2021-03-30 00:28guestNew Issue
2021-04-02 07:42gstecherFile Deleted: 1.nwk
2021-04-02 07:42gstecherNote Added: 0004567
2021-04-02 07:42gstecherStatusnew => resolved
2021-04-02 07:42gstecherResolutionopen => no change required
2021-04-02 07:42gstecherAssigned To => gstecher

Notes
(0002106)
Nikita Vikhrev   
1969-12-31 17:33   
That web page just shows ridiculous examples. For instance, we can't make any sense of "(,,(,));", "(:0.1,:0.2,(:0.3,:0.4):0.5)" and "A;" as a phylogenetic tree without any OTU labes. In MEGA, all sequences must have unique labels.
(0004567)
gstecher   
2021-04-02 07:42   
Hi Rashid,

I am writing in response to your question regarding the MEGA software. Although sequence alignment can be done in MEGA, it is not optimized for sequence alignment. However, there are many software applications that are specialized just for sequence alignment. For instance, you could try MAFFT.

Best regards,
Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu