MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0002900MEGA[All Projects] Feedbackpublic2021-07-16 04:112021-08-24 02:51
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusresolvedResolutionno change required 
PlatformOSOS Version
Product VersionMEGA 11 (Graphical Interface version) 
Target VersionFixed in Version 
First NameIlnam
Last NameKang
Emailikang@inha.ac.kr
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Summary0002900: How to get a file containing all bootstrap trees
DescriptionHi,

I'd like to apply the "Booster" bootstrap method to the MEGAX results.
To be able to use Booster, I need a file containing all bootstrap trees.
But, I cannot find how to get one from MEGAX.
Are there any ways to get a file containing all bootstrap trees?

ICYMI, below are several links for the "Booster" program.
https://www.nature.com/articles/s41586-018-0043-0 [^]
https://github.com/evolbioinfo/booster [^]
https://booster.pasteur.fr/ [^]

Thanks in advance.

Ilnam Kang
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Date ModifiedUsernameFieldChange
2021-07-16 04:11guestNew Issue
2021-07-19 07:50gstecherNote Added: 0004653
2021-07-19 07:50gstecherStatusnew => resolved
2021-07-19 07:50gstecherResolutionopen => no change required
2021-07-19 07:50gstecherAssigned To => gstecher
2021-08-24 02:51guestConfirm Emailikang@inha.ac.kr =>
2021-08-24 02:52guestIssue cloned: 0003004

Notes
(0004653)
gstecher   
2021-07-19 07:50   
Hi Ilnam,

I am writing in response to your question regarding the MEGA software. No, MEGA does not provide a way to get all replicate trees when using the bootstrap test.

Best regards,
Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu