MantisBT - MEGA
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0003610MEGAAlignment Explorerpublic2022-04-16 14:492023-04-14 18:54
guest 
 
normalminorhave not tried
newopen 
PCWindows10
MEGA 11 (Graphical Interface version) 
 
Laura
Pezzi
laura.pezzi@univ-amu.fr
laura.pezzi@univ-amu.fr
0003610: Problems with sequences explorer
Hi, I'm using MEGA11 on Windows 10 and the program bugs all the time. It's so slow, not fluent at all; the bar doesn't move fluently, I can barely select sequences with my mouse.

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Issue History
2022-04-16 14:49guestNew Issue
2022-04-16 14:49guestIssue generated from: 0003607
2023-04-14 18:54guestNote Added: 0006699

Notes
(0002403)
user614   
1969-12-31 17:33   
Problem was that the molecular_clock.htm template was being loaded instead of the ml_tree.htm template. Fixed it so that the molecular_clock.htm caption is displayed by calling showClockTreeResults()
(0002404)
user614   
1969-12-31 17:33   
Hi Yoshihiro,
I am writing in response to the bug report you submitted regarding crash when analyzing a user tree with molecular clock assumption in MEGA. Thanks for reporting this bug. We have resolved the problem and the patch will be included in the next release of MEGA.

Best regards,

Glen Stecher
(0005592)
user614   
1969-12-31 17:33   
Changed the template to report the p-value as P=some value. This is how any other program would report it.
(0005591)
user614   
1969-12-31 17:33   
Hello Jorg,
I am responding to your question regarding how MEGA reports p-values for the molecular clock test. Indeed this is done in a confusing way. I think that a better way to express this result is probably to just report the p-value as it is (i.e. P = 5.47121430322315E-10) instead of using the greater than or less than symbols. I will confer with my colleagues on the best way to fix this. Any way, we will correct the problem so that the next release of MEGA does not cause this confusion. Thanks for reporting this issue!

Best regards,

Glen Stecher
(0005594)
guest   
2022-04-16 14:17   
1
(0006699)
guest   
2023-04-14 18:54   
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