MantisBT - MEGA
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0000368MEGA[All Projects] Feedbackpublic2017-01-24 16:472017-01-27 12:59
guest 
gstecher 
normalminorhave not tried
resolvednot fixable 
 
 
jj
wu
seawjj@aliyun.com
seawjj@aliyun.com
0000368: Help for computer reporting that lack of enough memory.
Mega is powerful tool to alignment and built the NJ tree. But I was confused that the computer always reported the error of lacking of enough memory. I found that the computer storage space is not the problem, because my computer has a 12G memory, and in the process of continuous monitoring found that the computer RAM utilization has been below 40%, even when the error reported is not more than 50%. Also I increase the "MAX Memory in MB" in the MEGA muscle-Applink option, but it do not work.
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Issue History
2017-01-24 16:47guestNew Issue
2017-01-27 12:59gstecherNote Added: 0003747
2017-01-27 12:59gstecherStatusnew => resolved
2017-01-27 12:59gstecherResolutionopen => not fixable
2017-01-27 12:59gstecherAssigned To => gstecher

Notes
(0003747)
gstecher   
2017-01-27 12:59   
Hi JJ,

I am writing in response to your question regarding the MEGA software. The MUSCLE applink in MEGA is a 32-bit version so it can only address a limited amount of memory. If you are aligning a large amount of data, you might want to try using MAFFT or some other software.

--
Best regards,

Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu