MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0003866MEGA[All Projects] Feedbackpublic2022-08-09 09:252023-04-14 18:49
Reporterguest 
Assigned To 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusnewResolutionopen 
PlatformOSOS Version
Product VersionMEGA 11 (Graphical Interface version) 
Target VersionFixed in Version 
First NameAvril
Last NameAlfred
EmailAvril.Alfred@ufv.ca
Confirm EmailAvril.Alfred@ufv.ca
Summary0003866: MUSCLE version?
DescriptionHello!
I can't seem to determine which version of MUSCLE, MEGA 11 is using. Are you able to let me know?
Thank you for including the link to the original paper.
Kindest regards,
Avril

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Issue History
Date ModifiedUsernameFieldChange
1969-12-31 17:33user614Note Added: 0002670
1969-12-31 17:33user19Statusnew => assigned
1969-12-31 17:33user19Assigned To => user19
1969-12-31 17:33user19Assigned Touser19 => user614
1969-12-31 17:33user614Note Added: 0002990
1969-12-31 17:33user614Statusassigned => closed
1969-12-31 17:33user614Resolutionopen => unable to reproduce
2022-08-09 09:25guestNew Issue
2023-04-14 18:49guestNote Added: 0006629

Notes
(0002670)
user614   
1969-12-31 17:33   
Hello Swati,
I am responding to your question regarding sequence alignment in Mega. If your unaligned sequences are in a correctly formatted fasta file, Mega should have no problem reading the file. Then after alignment, you can export to the Mega format for further analysis. Mega assumes that any Mega formatted files are already aligned. What file format is your sequence data in? Also, your report indicates that you are aligning whole genomes. If this is the case, the alignment tools provided in Mega are probably not appropriate.

Best regards,

Glen Stecher
(0002990)
user614   
1969-12-31 17:33   
no response from user
(0006629)
guest   
2023-04-14 18:49   
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