MantisBT - MEGA
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0003995MEGA[All Projects] Feedbackpublic2022-10-14 18:362023-04-14 18:46
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normalminorhave not tried
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MEGA 11 (Graphical Interface version) 
 
Adrian
Gibbs
adrian_j_gibbs@hotmail.com
adrian_j_gibbs@hotmail.com
0003995: App to compare patristic distances in Nwk trees.
Hi Guys, Have you considered including an app for comparing two Newick trees (e.g. different versions of the same seqs) by graphing their patristic (pairwise) distances - a version of this called PATRISTIC in Github (Fourment) has not been updated. This would allow nts sequences and their encoded AA seqs to be compared for translational saturation - better than Xia's method in Dambe. Also useful for finding recombination and reassortment in alignments. Tnx. Adrian
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Issue History
1969-12-31 17:33user19Note Added: 0002750
1969-12-31 17:33user19Statusnew => resolved
1969-12-31 17:33user19Resolutionopen => fixed
1969-12-31 17:33user19Assigned To => user19
2022-10-14 18:36guestNew Issue
2023-04-14 18:46guestNote Added: 0006598

Notes
(0002750)
user19   
1969-12-31 17:33   
Dear user,

I haven’t heard of a specific date when MEGA 5.1 will be released in a “stable” phase. We just released the third beta for 5.1, after identifying a flaw (effecting only the beta) which messed up bootstrap calculations.

Significant testing and validation of any new features in MEGA is extremely important before we can stand behind a release and label it as stable. This latest beta “expires” at the end of July, so I suspect that we won’t have “stable” release until at least then.

I’m really sorry to give you that news, but it’s important to remember that this is a beta and you shouldn’t publish the results it generates (until you replicate them with a released stable version).

Daniel Peterson
(0006598)
guest   
2023-04-14 18:46   
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