MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0005713MEGAAlignment Explorerpublic2023-08-23 00:472023-08-23 00:47
Reporterguest 
Assigned To 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusnewResolutionopen 
PlatformPCOSLinuxOS VersionDebian
Product VersionMEGA 11 (Graphical Interface version) 
Target VersionFixed in Version 
First NameKlavs
Last NameJermakovs
Emailklavs994@inbox.lv
Confirm Emailklavs994@inbox.lv
Summary0005713: Fasta header names change
DescriptionWhen loading in the sequences from .fasta file into MEGA alignment viewer the header names are processed in a way that removes the underline. ex. WP_189318088.1 becomes WP 099680089.1 this behavior introduces unwanted spaces which otherwise are often reserved as delimiters between sequence ID code, Taxa, Description, Name.
Steps To Reproduce-Open alignment tool and select reading in .fasta from user file.
-Read in .fasta file with sequence headers that contain underlines (download any from uniprot.com).
-Compare MEGA displayed sequence ID with the raw header in the initial .fasta file.
Additional InformationThis behavior leads to non-standard .fasta files that are barely viable for other downstream tools/use cases.
TagsNo tags attached.
Relationships
Attached Files? comparison.fasta (2,086) 2023-08-23 00:47
https://megasoftware.net/mantis_bt/
Issue History
Date ModifiedUsernameFieldChange
2023-08-23 00:47guestNew Issue
2023-08-23 00:47guestFile Added: comparison.fasta

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