MantisBT - MEGA
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0000608MEGAAlignment Explorerpublic2017-11-24 04:232017-11-28 08:46
guest 
gstecher 
normalminorhave not tried
resolvedno change required 
PCWindows10
MEGA-CC 11 (command line version) 
 
Marc
Granés
mb2subi@gmail.com
mb2subi@gmail.com
0000608: Duplicate names
Doing the phylogenetics analysis with MEGA-CC I obtain the error "Tow seqeucnes with the same name, but data does not appear to be in the proper interleaved format. Check for duplicate naems (in line 8979).

First of all, I do not have line 8979 in my file. I have taken the data and I have checked if there are duplicate names but there are not. Moreover, I did the same analysis but using MEGA, with the same data, and I did not have the error.

I attach the output file of the alignment


How can I solve the problem? Thanks in advance.
No tags attached.
? raw_align.meg (243,268) 2017-11-24 04:23
https://megasoftware.net/mantis_bt/
Issue History
2017-11-24 04:23guestNew Issue
2017-11-24 04:23guestFile Added: raw_align.meg
2017-11-28 08:46gstecherNote Added: 0003893
2017-11-28 08:46gstecherStatusnew => resolved
2017-11-28 08:46gstecherResolutionopen => no change required
2017-11-28 08:46gstecherAssigned To => gstecher

Notes
(0003893)
gstecher   
2017-11-28 08:46   
Hi Marc,

I am writing in response to your question regarding the MEGA software. Commas are not allowed in sequence names when using the .meg format for alignments. You should replace the sequence name Tg3,2 with something like Tg3_2.

--
Best regards,

Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu