MantisBT - MEGA
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0000611MEGAFile Conversionpublic2017-11-27 13:142017-11-28 08:20
guest 
gstecher 
normalminorhave not tried
resolvedno change required 
PCWindows10
MEGA 11 (Graphical Interface version) 
 
Colin
Brose
gbrose@hotmail.com
gbrose@hotmail.com
0000611: Invalid base found: , (in line 7)
here is the file as converted from fasta to .meg
this is apparently not correct, but I cannot determine why. It says there is an comma at position 6 in line 7 and there is not one.
Run dump.meg file with given information through mega.
Fail to produce results.
No tags attached.
? dump.meg (1,471) 2017-11-27 13:14
https://megasoftware.net/mantis_bt/
Issue History
2017-11-27 13:14guestNew Issue
2017-11-27 13:14guestFile Added: dump.meg
2017-11-28 08:20gstecherNote Added: 0003892
2017-11-28 08:20gstecherStatusnew => resolved
2017-11-28 08:20gstecherResolutionopen => no change required
2017-11-28 08:20gstecherAssigned To => gstecher

Notes
(0003892)
gstecher   
2017-11-28 08:20   
Hi Colin,

I am writing in response to your question regarding the MEGA software. The dump.meg file you have is not formatted properly. First, commas are not allowed in sequence names so you should remove those. Second, the sequences are not aligned so you cannot put them into a .meg file. You should keep the data in a fasta formatted file, open it in MEGA, align the sequences, then export to the .meg format.

--
Best regards,

Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu