|
|
Hi Glen,
I installed the new build and it now works perfectly, thank you so much. Have a great weekend.
Best regards,
Meike
---
Meike Hüdig
Heinrich-Heine-University
Workgroup Maurino: Plant Molecular Physiology and Biotechnology
Universitätsstrasse 1, Building 26.03.U1 Room 37
40225 Düsseldorf
GERMANY
CEPLAS - Cluster of Excellence on Plant Science
Am 2018-08-02 21:32, schrieb Glen Stecher:
> Hi Meike,
>
> Thanks for sending that file. It looks like MEGA X wrote the newick
> file using the comma character for the decimal separator but when MEGA
> X reads the newick file it expects the period character for the
> decimal separator. Can you download and install an updated build using
> the link below. That build should force MEGA X to use the period
> character as the decimal separator when writing the newick file. Then
> you should be able to open the mtsx file and export the tree to a new
> newick file that is formatted correctly.
>
> https://www.megasoftware.net/releases/MEGA_X_10.0.4_win64_setup_180801.exe [^]
>
> Thanks again for your help!
>
>
> On 08/02/2018 12:26 PM, Meike Hüdig wrote:
>> Hi Glen,
>> just came back from brushing me teeth, of course you need the nwk file as well. *facepalm*
>> Sorry, it's attached. The heat is getting to me.
>>
>> Meike
>>
>> ---
>> Meike Hüdig
>> Heinrich-Heine-University
>> Workgroup Maurino: Plant Molecular Physiology and Biotechnology
>> Universitätsstrasse 1, Building 26.03.U1 Room 37
>> 40225 Düsseldorf
>> GERMANY
>>
>> CEPLAS - Cluster of Excellence on Plant Science
>>
>> Am 2018-08-02 21:20, schrieb Glen Stecher:
>>> Hi Meike,
>>>
>>> Thanks for sending the screen shot. Can you also send me the Newick
>>> file? From the image it looks like perhaps the decimal separator
>>> character is not handled properly by MEGA.
>>>
>>>
>>> On 08/02/2018 12:17 PM, Meike Hüdig wrote:
>>>> Hi Glen,
>>>>
>>>> thanks for coming back to me so soon. I attached a screenshot of the tree I get, when I use MegaX (v10.0.4) for the export and re-import. Additionally, I reproduced successfully this error on my PC at home (which is also running Win10). Maybe you could give me a guess for a fix, but I knwo this might be not doable as you cannot reproduce the problem.
>>>> Thank you so much anyway.
>>>>
>>>> Best regards,
>>>> Meike
>>>>
>>>> ---
>>>> Meike Hüdig
>>>> Heinrich-Heine-University
>>>> Workgroup Maurino: Plant Molecular Physiology and Biotechnology
>>>> Universitätsstrasse 1, Building 26.03.U1 Room 37
>>>> 40225 Düsseldorf
>>>> GERMANY
>>>>
>>>> CEPLAS - Cluster of Excellence on Plant Science
>>>>
>>>> Am 2018-08-02 17:29, schrieb Glen Stecher:
>>>>> Hi Meike,
>>>>>
>>>>> I am writing in response to the bug report you recently submitted
>>>>> regarding the MEGA software. I am not able to duplicate the error you
>>>>> described in your report. Regardless of which application I use to
>>>>> open the exported newick file, I get the same tree. The taxa may be
>>>>> arranged a bit differently but the topology itself is still the same.
>>>>>
>>>>> -- Best regards,
>>>>>
>>>>> Glen Stecher
>>>>> Institute for Genomics and Evolutionary Medicine
>>>>> igem.temple.edu |
|
20180724_200bootstraps_60percent.mtsx (170,450) 2018-08-02 04:28