MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0000088MEGA[All Projects] Feedbackpublic2016-03-08 07:202016-03-14 14:03
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusresolvedResolutionno change required 
PlatformOSOS Version
Product VersionMEGA 11 (Graphical Interface version) 
Target VersionFixed in Version 
First NameMuhammed
Last Nameduman
Emailmduman@uludag.edu.tr
Confirm Emailmduman@uludag.edu.tr
Summary0000088: About using program
DescriptionDear related,

I'm trying to use MEGA 7 software. I built an alignment and i construct phylogenetic tree with UPGMA. I want to see sequence differences with percentage (dice similarity coefficient percentage) but i cant do that. I construct tree with some values but i want to edit difference with percentage. Could you help me about this issue?

Thanks, best regards.
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Date ModifiedUsernameFieldChange
2016-03-08 07:20guestNew Issue
2016-03-14 14:03gstecherNote Added: 0003633
2016-03-14 14:03gstecherStatusnew => resolved
2016-03-14 14:03gstecherResolutionopen => no change required
2016-03-14 14:03gstecherAssigned To => gstecher

Notes
(0003633)
gstecher   
2016-03-14 14:03   
Hi Muhammed,

I am writing in response to your question regarding the MEGA software. It sounds like what you want is to create a distance matrix with p-distance which shows proportion difference between sequences. Then you can convert it to similarity. Distance matrix analysis is under the 'Distances' menu.

--
Best regards,

Glen Stecher