MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0000913MEGA[All Projects] Feedbackpublic2018-09-05 23:132018-09-12 10:22
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusresolvedResolutionno change required 
PlatformOSOS Version
Product Version 
Target VersionFixed in Version 
First NameRan
Last NameBerzak
Emailranberzak@gmail.com
Confirm Emailranberzak@gmail.com
Summary0000913: scale bar and cutoff in ML tree
DescriptionI have generated a phylogenetic tree by Maximum likelihood methods with 500 bootstrap replicates using MEGA 7.0.
In the original tree, I have a scale bar of 0.05 for the branch width. when I am setting a cutoff of 70% for the consensus or for the condensed tree the scale bar is missing.
How can I maintain the scale bar and the cutoff together?
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Issue History
Date ModifiedUsernameFieldChange
2018-09-05 23:13guestNew Issue
2018-09-06 13:34gstecherNote Deleted: 0000846
2018-09-06 13:34gstecherNote Deleted: 0000844
2018-09-12 10:22gstecherNote Added: 0004108
2018-09-12 10:22gstecherStatusnew => resolved
2018-09-12 10:22gstecherResolutionopen => no change required
2018-09-12 10:22gstecherAssigned To => gstecher

Notes
(0004108)
gstecher   
2018-09-12 10:22   
Hi Ran,

I am writing in response to your question regarding the MEGA software. The scale bar in MEGA's Tree Explorer is hidden when showing consensus/condensed trees because those trees are not scaled so a scale bar is not meaningful.

--
Best regards,

Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu