MantisBT - MEGA
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IDProjectCategoryView StatusDate SubmittedLast Update
0000995MEGA[All Projects] Feedbackpublic2018-11-09 01:072018-11-21 11:26
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusresolvedResolutionfixed 
PlatformPCOSWindowsOS Version10
Product Version 
Target VersionFixed in Version 
First NameJacopo
Last NameD`Ercole
Emailjdercole@uoguelph.ca
Confirm Emailjdercole@uoguelph.ca
Summary0000995: UPGMA tree-Data coverage issue
DescriptionTo whom it may concern,

I am experiencing some issues when I attempt to generate the UPGMA tree. Everything appears to be in order until the estimation of data coverage is calculated. At this point the software freezes and the only thing I can do is to close the software.

I am using a large dataset composed of ca. 6000 sequences whose length is ca. 700bp.
I have tried to reduce the dataset and Mega can successfully complete the analysis.

Could you please help me to solve this issue?

Thank you
Best regards
Jacopo

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Issue History
Date ModifiedUsernameFieldChange
2018-11-09 01:07guestNew Issue
2018-11-12 16:36gstecherFile Deleted: known antimic.meg
2018-11-12 16:36gstecherNote Deleted: 0000905
2018-11-12 16:36gstecherNote Deleted: 0001080
2018-11-19 11:18gstecherAssigned To => gstecher
2018-11-19 11:18gstecherStatusnew => assigned
2018-11-19 11:18gstecherNote Added: 0004147
2018-11-21 11:26gstecherNote Added: 0004148
2018-11-21 11:26gstecherStatusassigned => resolved
2018-11-21 11:26gstecherResolutionopen => fixed

Notes
(0004147)
gstecher   
2018-11-19 11:18   
Hi Jacopo,

I am writing in response to the bug report you recently submitted regarding the MEGA software. Which version of MEGA are you using? Also, can you send me the data set you were using when the error occurred so that I can duplicate the error?

--
Best regards,
Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu
(0004148)
gstecher   
2018-11-21 11:26   
Dear Glen,


Thanks for helping me with this.

I was using the version 7.0.26. I have now downloaded the version X and everything works well!


Please, just let me know if you still want the dataset I have used.


Thanks

Greetings

jacopo
From: Glen Stecher <tuf81013@temple.edu>
Sent: Monday, November 19, 2018 2:18:18 PM
To: Jacopo D'Ercole
Subject: MEGA error
 
Hi Jacopo,

I am writing in response to the bug report you recently submitted
regarding the MEGA software. Which version of MEGA are you using? Also,
can you send me the data set you were using when the error occurred so
that I can duplicate the error?

--
Best regards,
Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu