0000244: Unexpected end of file while reading taxa names

(0000164)
gstecher (administrator)
1969-12-31 17:33

I attempted to verify this bug and noticed no discernable difference in execution time. I\'ll ask the user for his data file and see if it is exceptionally large or something.

(0000464)
Nikita Vikhrev (reporter)
1969-12-31 17:33

I have made some optimization to speed up more than two times.

(0000466)
gstecher (administrator)
1969-12-31 17:33

I applied the fixes from Tamura to the MEGA source code.

(0000467)
paul (reporter)
1969-12-31 17:33

Bug is fixed to the MEGA4 source. This bug is closed.

(0003694)
gstecher (administrator)
2016-09-06 12:51

Hi Dr. Gonzalo Ocejo-Vinyals,

I am writing in response to your question regarding the MEGA software. In order to compute pairwise distances or construct an NJ tree in MEGA you will need to have a multiple sequence alignment in MEGA or fasta format. You can review the help documentation for descriptions of these formats. Also, some example files are distributed with MEGA.

--
Best regards,

Glen Stecher

Issue History
Date Modified	Username	Field	Change
2016-08-29 02:40	guest	New Issue
2016-08-29 02:40	guest	File Added: KIR-POP.txt
2016-09-06 12:51	gstecher	Note Added: 0003694
2016-09-06 12:51	gstecher	Status	new => resolved
2016-09-06 12:51	gstecher	Resolution	open => no change required
2016-09-06 12:51	gstecher	Assigned To	=> gstecher

Notes
(0000164) gstecher (administrator) 1969-12-31 17:33	I attempted to verify this bug and noticed no discernable difference in execution time. I\'ll ask the user for his data file and see if it is exceptionally large or something.

(0000464) Nikita Vikhrev (reporter) 1969-12-31 17:33	I have made some optimization to speed up more than two times.

(0000466) gstecher (administrator) 1969-12-31 17:33	I applied the fixes from Tamura to the MEGA source code.

(0000467) paul (reporter) 1969-12-31 17:33	Bug is fixed to the MEGA4 source. This bug is closed.

(0003694) gstecher (administrator) 2016-09-06 12:51	Hi Dr. Gonzalo Ocejo-Vinyals, I am writing in response to your question regarding the MEGA software. In order to compute pairwise distances or construct an NJ tree in MEGA you will need to have a multiple sequence alignment in MEGA or fasta format. You can review the help documentation for descriptions of these formats. Also, some example files are distributed with MEGA. -- Best regards, Glen Stecher

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