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| ID | Project | Category | View Status | Date Submitted | Last Update | ||||||||
| 0001142 | MEGA | [All Projects] Feedback | public | 2019-03-04 16:04 | 2023-04-19 02:06 | ||||||||
| Reporter | guest | ||||||||||||
| Assigned To | gstecher | ||||||||||||
| Priority | normal | Severity | minor | Reproducibility | have not tried | ||||||||
| Status | feedback | Resolution | reopened | ||||||||||
| Platform | OS | ||||||||||||
| Product Version | MEGA-CC 11 (command line version) | ||||||||||||
| Target Version | Fixed in Version | ||||||||||||
| Summary | 0001142: megacc requires X11 even tho it's a commandline | ||||||||||||
| Description | I'm admin on a UCI cluster that has mega installed. I'm trying to help a user get the megacc commandline version running as a batch job, but it insists on an X11 connection: $ megacc (megacc:17433): Gtk-WARNING **: cannot open display: altho this is only a warning, the program dies and won't progress. Is there a way to shut this off? Trying to set 'xhost +', explicitly set a DISPLAY, etc does not work in batch mode. megacc -h does not seem to provide a way to do this. | ||||||||||||
| Tags | No tags attached. | ||||||||||||
| Attach Tags | (Separate by ",") | ||||||||||||
| First Name | Harry | ||||||||||||
| Last Name | Mangalam | ||||||||||||
| harry.mangalam@uci.edu | |||||||||||||
| Confirm Email | harry.mangalam@uci.edu | ||||||||||||
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(0004205) gstecher (administrator) 2019-03-05 10:02 |
Hi Harry, I am writing in response to the bug report you recently submitted regarding the megacc software. To resolve the issue you encountered, you can download an updated build of megacc using the link below: http://www.megasoftware.net/releases/megacc [^] This is just the binary executable (no installer) so you should just move it to /usr/lib/megax/ to replace the megacc file there (or just uninstall megax and put the megacc file in the path - maybe /usr/local/bin). This new build has no dependency on GTK so it should run fine on a headless machine. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu |
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(0007058) guest (reporter) 2023-04-19 02:06 |
The link died, where I can find the megacc build has no dependency on GTK so it should run fine on a headless machine.Thanks a lot! |
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Notes |
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Issue History |
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| Date Modified | Username | Field | Change |
| 2019-03-04 16:04 | guest | New Issue | |
| 2019-03-05 09:32 | gstecher | File Deleted: mega4.pdf | |
| 2019-03-05 10:02 | gstecher | Note Added: 0004205 | |
| 2019-03-05 10:02 | gstecher | Status | new => resolved |
| 2019-03-05 10:02 | gstecher | Resolution | open => fixed |
| 2019-03-05 10:02 | gstecher | Assigned To | => gstecher |
| 2019-03-05 12:28 | gstecher | Note Deleted: 0001016 | |
| 2023-04-19 02:06 | guest | Note Added: 0007058 | |
| 2023-04-19 02:06 | guest | Status | resolved => feedback |
| 2023-04-19 02:06 | guest | Resolution | fixed => reopened |
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Issue History |
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