MantisBT

View Issue Details Jump to Notes ] Issue History ] Print ]
IDProjectCategoryView StatusDate SubmittedLast Update
0002240MEGACalculation Errorpublic2020-09-19 20:392020-09-21 10:32
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusresolvedResolutionwon't fix 
PlatformPCOSWindows 
Product VersionMEGA 11 (Graphical Interface version) 
Target VersionFixed in Version 
Summary0002240: Problema con alineacion
DescriptionI'm trying to align 437 DNA sequences with about 16,600 bases each, but after several weeks of processing the alignment doesn't finish.
I do not know if this is due to MEGA having a time or memory restriction?
TagsNo tags attached.
Attach Tags (Separate by ",")
First NameJulio
Last NameValdez
Emailjvaldezgonzalez@itmexicali.edu.mx
Confirm Emailjvaldezgonzalez@itmexicali.edu.mx
Attached Files

- Relationships

-  Notes
(0004507)
gstecher (administrator)
2020-09-21 10:32

Hi Julio,

I am writing in response to the bug report you recently submitted regarding the MEGA software. Unfortunately, MEGA is not optimized for aligning large data sets. For aligning large data sets you may want to use something like MAFFT.

--
Best regards,
Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu

- Issue History
Date Modified Username Field Change
2020-09-19 20:39 guest New Issue
2020-09-21 10:32 gstecher Note Added: 0004507
2020-09-21 10:32 gstecher Status new => resolved
2020-09-21 10:32 gstecher Resolution open => won't fix
2020-09-21 10:32 gstecher Assigned To => gstecher


Copyright © 2000 - 2024 MantisBT Team
Powered by Mantis Bugtracker