0000584: strict or Majority-Rule consensus - MantisBT

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ID

Project

Category

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Date Submitted

Last Update

0000584

MEGA

[All Projects] Feedback

public

2017-11-01 00:22

2017-11-07 09:48

Reporter

guest

Assigned To

gstecher

Priority

normal

Severity

minor

Reproducibility

have not tried

Status

resolved

Resolution

no change required

Platform

OS

Product Version

MEGA 11 (Graphical Interface version)

Target Version

Fixed in Version

Summary

0000584: strict or Majority-Rule consensus

Description

When a bootstrap MP tree was created by Mega, was it a strict or Majority-Rule consensus? If it may be either a strict or a Majority-Rule consensus, how to make Mega produce only a strict consensus tree based on different data?

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First Name

X.

Last Name

Li

Email

908921670@qq.com

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908921670@qq.com

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Notes
(0003884) gstecher (administrator) 2017-11-07 09:48	Hi X, The bootstrap consensus tree in MEGA is a Majority-Rule consensus. When using the MP method, if there are multiple trees that are equally parsimonious, then you can produce a consensus tree from among those multiple trees. In Tree Explorer, click Compute->Consensus Tree. For a Strict consensus tree, set the cutoff value for the consensus tree to 100. Any other value will produce a Majority-Rule consensus tree. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu

Issue History
Date Modified	Username	Field	Change
2017-11-01 00:22	guest	New Issue
2017-11-07 09:23	gstecher	Note Deleted: 0000475
2017-11-07 09:23	gstecher	Note Deleted: 0000477
2017-11-07 09:48	gstecher	Note Added: 0003884
2017-11-07 09:48	gstecher	Status	new => resolved
2017-11-07 09:48	gstecher	Resolution	open => no change required
2017-11-07 09:48	gstecher	Assigned To	=> gstecher

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