0001141: comparison of Mega results with other programs - MantisBT

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0001141

MEGA

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public

2019-03-04 10:31

2022-12-22 03:11

Reporter

guest

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gstecher

Priority

normal

Severity

minor

Reproducibility

have not tried

Status

resolved

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no change required

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OS

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MEGA Website

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Fixed in Version

Summary

0001141: comparison of Mega results with other programs

Description

Hi: I'm tired of my colleagues criticizing Mega. Have you published papers that show that the results from Mega (phylogeny estimation) are robust with results from other programs? Thanks, Bob Zink

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Zink

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Notes
(0004209) gstecher (administrator) 2019-03-18 08:49	Hi Bob, I am writing in response to your question regarding the MEGA software. A comparison of MEGA phylogeny construction using Maximum Likelihood versus PhyML and RaXML is given in: https://www.megasoftware.net/pdfs/TamuraKumar11.pdf [^] This is the only formal comparison of MEGA's tree construction results with other programs that I have seen but there may be other comparisons in the literature. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu

Issue History
Date Modified	Username	Field	Change
2019-03-04 10:31	guest	New Issue
2019-03-18 08:35	gstecher	Note Deleted: 0001025
2019-03-18 08:49	gstecher	Note Added: 0004209
2019-03-18 08:49	gstecher	Status	new => resolved
2019-03-18 08:49	gstecher	Resolution	open => no change required
2019-03-18 08:49	gstecher	Assigned To	=> gstecher
2022-11-16 08:55	guest	Tag Attached: RAxML
2022-12-22 03:11	guest	Tag Detached: RAxML

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