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| ID | Project | Category | View Status | Date Submitted | Last Update |
| 0002481 | MEGA | Alignment Explorer | public | 2021-01-12 20:01 | 2021-01-14 10:12 |
|
| Reporter | guest | |
| Assigned To | gstecher | |
| Priority | normal | Severity | minor | Reproducibility | have not tried |
| Status | resolved | Resolution | fixed | |
| Platform | PC | OS | Windows | |
| Product Version | MEGA 11 (Graphical Interface version) | |
| Target Version | | Fixed in Version | | |
|
| Summary | 0002481: MUSCLE Alignment Output is Different Between Operating Systems |
| Description | The same two sequences were aligned using the MUSCLE algorithm, by codon, with gaps not deleted. The alignment outputs were different between MEGA for Windows 10 and MEGAX for OS X Catalina.
The same two sequences were aligned using the MUSCLE algorithm, by codon, with gaps not deleted. The alignment was different between MEGA for Windows 10 and MEGAX for OS X Catalina. |
| Steps To Reproduce | 1. Open two .ab1 files in MEGA
2. For both files, press "add unmasked sequence to alignment explorer"
3. Get the reverse complement of F2_F2R
4. Align using MUSCLE by codon, with gaps not deleted. |
| Additional Information | The zip file attached contains 4 files:
Two .ab1 files for a contig assembly activity
Two .mas alignment session files with the output of the MUSCLE algorithm for Windows and OS X
|
| Tags | No tags attached. |
| Attach Tags | (Separate by ",")
|
|
| First Name | Zaki |
| Last Name | Suficiencia |
| Email | zaki_suficiencia@dlsu.edu.ph |
| Confirm Email | zaki_suficiencia@dlsu.edu.ph |
|
| Attached Files |  MUSCLE bug.zip (283,935 bytes) 2021-01-12 20:01 |
|
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