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| ID | Project | Category | View Status | Date Submitted | Last Update | ||||
| 0000775 | MEGA | Calculation Error | public | 2018-05-21 23:08 | 2018-05-30 13:14 | ||||
| Reporter | guest | ||||||||
| Assigned To | gstecher | ||||||||
| Priority | normal | Severity | minor | Reproducibility | have not tried | ||||
| Status | resolved | Resolution | no change required | ||||||
| Platform | PC | OS | Linux | ||||||
| Product Version | MEGA-CC 11 (command line version) | ||||||||
| Target Version | Fixed in Version | ||||||||
| Summary | 0000775: error while running phylogeny or model generation | ||||||||
| Description | I am using MEGA 7 and was trying to generate a phylogenetic tree using maximum likelihood for > 1500 protein sequences. I ran the alignment also in MEGA using MUSCLE, it ran fine. While running either model selection program or phylogeny, i am getting the following error: "insufficient data available for ML analysis. Please validate your sequence data" I used the program earlier for 0000529:0000400 sequences and it ran fine. Does the number of sequences is an issue? Please help. | ||||||||
| Tags | No tags attached. | ||||||||
| Attach Tags | (Separate by ",") | ||||||||
| First Name | Nidhi | ||||||||
| Last Name | Batra | ||||||||
| nidhi.batra@igib.in | |||||||||
| Confirm Email | nidhi.batra@igib.in | ||||||||
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(0004015) gstecher (administrator) 2018-05-30 13:14 |
Hi Nidhi, I am writing in response to your recent question regarding the MEGA software. The error message you describe seems to indicate that the handling of Gaps/Missing Data results in no data being available. In the Analysis Preferences dialog try setting the Gaps/Missing Data Treatment option to Use All Sites. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu |
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Issue History |
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| Date Modified | Username | Field | Change |
| 2018-05-21 23:08 | guest | New Issue | |
| 2018-05-22 09:48 | gstecher | Note Deleted: 0000723 | |
| 2018-05-22 09:48 | gstecher | File Deleted: Bug report_070627.txt | |
| 2018-05-30 13:14 | gstecher | Note Added: 0004015 | |
| 2018-05-30 13:14 | gstecher | Status | new => resolved |
| 2018-05-30 13:14 | gstecher | Resolution | open => no change required |
| 2018-05-30 13:14 | gstecher | Assigned To | => gstecher |
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Issue History |
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