0000128: Question about alignment tool

(0000014)
gstecher (administrator)
1969-12-31 17:33

The website does seem to imply that ratios will be calculated within the program. Perhaps we should modify the website.

(0000066)
gstecher (administrator)
1969-12-31 17:33

Mistake ratios not available. Included in future.

(0003651)
gstecher (administrator)
2016-04-21 07:35

Hi Erin,

I am writing in response to your question regarding the MEGA software. You can visualize variable sites by using the Sequence Data Explorer. First, save your alignment to a .meg file. Then open it in MEGA and open the Sequence Data Explorer window. In this window there is an option to highlight variable sites.

--
Best regards,

Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu

Issue History
Date Modified	Username	Field	Change
2016-04-20 11:27	guest	New Issue
2016-04-21 07:35	gstecher	Note Added: 0003651
2016-04-21 07:35	gstecher	Status	new => resolved
2016-04-21 07:35	gstecher	Resolution	open => no change required
2016-04-21 07:35	gstecher	Assigned To	=> gstecher

Notes
(0000014) gstecher (administrator) 1969-12-31 17:33	The website does seem to imply that ratios will be calculated within the program. Perhaps we should modify the website.

(0000066) gstecher (administrator) 1969-12-31 17:33	Mistake ratios not available. Included in future.

(0003651) gstecher (administrator) 2016-04-21 07:35	Hi Erin, I am writing in response to your question regarding the MEGA software. You can visualize variable sites by using the Sequence Data Explorer. First, save your alignment to a .meg file. Then open it in MEGA and open the Sequence Data Explorer window. In this window there is an option to highlight variable sites. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu

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