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| ID | Project | Category | View Status | Date Submitted | Last Update | ||||
| 0000135 | MEGA | [All Projects] Feedback | public | 2016-04-26 00:00 | 2016-04-27 09:40 | ||||
| Reporter | guest | ||||||||
| Assigned To | gstecher | ||||||||
| Priority | normal | Severity | minor | Reproducibility | have not tried | ||||
| Status | resolved | Resolution | fixed | ||||||
| Platform | OS | ||||||||
| Product Version | MEGA 11 (Graphical Interface version) | ||||||||
| Target Version | Fixed in Version | ||||||||
| Summary | 0000135: FIle for Phylogenetic Tree | ||||||||
| Description | Hello, I have been trying to use MEGA to build up phylogenetic tree and related analysis. I have distance data calculated from different software (NTSYS) and this saves files into .NTS format. I want to use my distance file for phylogenetic analysis using MEGA. I tried converting file to nexus using http://phylogeny.lirmm.fr/phylo_cgi/data_converter.cgi. [^] But not successful. Please help me how to convert the file compatible to MEGA. Thank you. Sonia Chadha | ||||||||
| Tags | No tags attached. | ||||||||
| Attach Tags | (Separate by ",") | ||||||||
| First Name | Sonia | ||||||||
| Last Name | Chadha | ||||||||
| schadha@barc.gov.in | |||||||||
| Confirm Email | schadha@barc.gov.in | ||||||||
| Attached Files |  M608.NX (74,168 bytes) 1969-12-31 17:33 | ||||||||
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(0003655) gstecher (administrator) 2016-04-27 09:40 |
Hi Sonia, I am writing in response to your question regarding how to use a distance matrix in MEGA for phylogenetic construction. To use your distance data, you will need to convert the data into a MEGA formatted file. Please see the attached for an example of the format. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu |
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Issue History |
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| Date Modified | Username | Field | Change |
| 2016-04-26 00:00 | guest | New Issue | |
| 2016-04-27 09:40 | gstecher | Note Added: 0003655 | |
| 2016-04-27 09:40 | gstecher | Status | new => resolved |
| 2016-04-27 09:40 | gstecher | Resolution | open => fixed |
| 2016-04-27 09:40 | gstecher | Assigned To | => gstecher |
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Issue History |
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