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| ID | Project | Category | View Status | Date Submitted | Last Update |
| 0001714 | MEGA | Alignment Explorer | public | 2020-01-16 03:01 | 2020-01-17 08:04 |
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| Reporter | guest | |
| Assigned To | gstecher | |
| Priority | normal | Severity | minor | Reproducibility | have not tried |
| Status | assigned | Resolution | open | |
| Platform | Mac | OS | OS X | |
| Product Version | | |
| Target Version | | Fixed in Version | | |
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| Summary | 0001714: Alignment editing is very slow |
| Description | When trying to modify a large alignment (>100 seqs, around 1000 bp long) in MegaX each edit (e.g. gap insertion) takes a lot of time (in the order of few seconds). The same kind of editing (using the same input file) is very fast when using Mega7.
Also: in MegaX the output file of "save file using only highlighted sites (e.g. 4 fold degenerate sites)" actually corresponds to the entire alignment. I have tried using different output formats, changing to "only not highlighted sites" and checking the "3rd-codon only" option, but the results do not change. |
| Tags | No tags attached. |
| Attach Tags | (Separate by ",")
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| First Name | Lino |
| Last Name | Ometto |
| Email | lino.ometto@unipv.it |
| Confirm Email | lino.ometto@unipv.it |
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| Attached Files | |
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