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ID | Project | Category | View Status | Date Submitted | Last Update | ||||||||
0000185 | MEGA | [All Projects] Feedback | public | 2016-06-02 11:48 | 2016-06-02 11:48 | ||||||||
Reporter | guest | ||||||||||||
Assigned To | |||||||||||||
Priority | normal | Severity | minor | Reproducibility | have not tried | ||||||||
Status | new | Resolution | open | ||||||||||
Platform | OS | ||||||||||||
Product Version | MEGA-CC 11 (command line version) | ||||||||||||
Target Version | Fixed in Version | ||||||||||||
Summary | 0000185: megacc will not produce distance matrix if two sequence have no overlapp | ||||||||||||
Description | megacc (mac 10.11) will not produce distance matrix for several sequences if two of them have no aligned bases. An error message mentions that the matrix will have 'n/c' for these two sequences if using pairwise deletion, which I am. This is what happens when calculating the distance matrix through Mega 6.0 (distance matrix is produced with 'n/c' listed for the two non-overlappign sequences, but no matrix is produced when using megacc. | ||||||||||||
Tags | No tags attached. | ||||||||||||
Attach Tags | (Separate by ",") | ||||||||||||
First Name | rex | ||||||||||||
Last Name | malmstrom | ||||||||||||
rrmalmstrom@lbl.gov | |||||||||||||
Confirm Email | rrmalmstrom@lbl.gov | ||||||||||||
Attached Files | test.mts (29,497 bytes) 1969-12-31 17:33 | ||||||||||||
Notes | |
(0000104) Nikita Vikhrev (reporter) 1969-12-31 17:33 |
The link to the attached file is again dead. Here is the copy of source. Please check it out. It is annoying that I have to dig the location by FTP all the time. <tr class=\"row-2\"> <td class=\"category\"> Attached Files </td> <td colspan=\"5\"> <a href=\"/home/megasoftware/www/mantis/0000185-test.mts\">0000185-test.mts</a> (29 KB) <span class=\"italic\">03-05 05:55</span> [<a class=\"small-link\" href=\"http://www.megasoftware.net/mantis/bug_file_delete.php?f_id=0000185&f_file_id=0000043\">Delete</a> [^]] </td> </tr> |
(0000105) gstecher (administrator) 1969-12-31 17:33 |
This is the link all my browsers show. http://www.megasoftware.net/mantis/uploads/0000185-test.mts [^] I tested three different browsers and I can\'t reproduce your problem. Which browser are you using?? |
(0000108) Nikita Vikhrev (reporter) 1969-12-31 17:33 |
I\'m using IE6. I will also try different browser too. But, I forgot PW for mantis. Could you e-mail it to me? Thanks. As for the bug reported (it is not real bug though), I will fix within a few day. edited on: 03-08 18:12 |
(0000110) Nikita Vikhrev (reporter) 1969-12-31 17:33 |
Fixed. Also, several small bugs found during the bug-fixing have been fixed. Accordingly, one menu item to \"clear selected subtree option\" has been added. |
Issue History | |||
Date Modified | Username | Field | Change |
2016-06-02 11:48 | guest | New Issue |
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