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| ID | Project | Category | View Status | Date Submitted | Last Update | ||||
| 0002029 | MEGA | File Conversion | public | 2020-06-02 17:07 | 2020-06-09 07:46 | ||||
| Reporter | guest | ||||||||
| Assigned To | gstecher | ||||||||
| Priority | normal | Severity | minor | Reproducibility | have not tried | ||||
| Status | resolved | Resolution | no change required | ||||||
| Platform | Mac | OS | OS X | ||||||
| Product Version | MEGA 11 (Graphical Interface version) | ||||||||
| Target Version | Fixed in Version | ||||||||
| Summary | 0002029: file conversion to MEG will not work | ||||||||
| Description | Converting a fasta format text file to MEG keeps on giving the same error: "MEGA has detected two sequences with the same name, but the data does not appear to be proper interleaved format. Check for duplicate names. (in line 67)" The file has been inspected numerous times, incl with find command, there are no duplicate names. Line 67 is an amino acid sequence string, there are no odd characters. I have tried to convert this file from a word docx, from a word doc, from a txt file, copied and pasted in "unformatted" etcetcetc. Nothing works. When I split it in two, both sections work, but I cannot seem to convert the whole file as a MEG file, and hence I am stuck. No tree:( | ||||||||
| Tags | No tags attached. | ||||||||
| Attach Tags | (Separate by ",") | ||||||||
| First Name | Hanke | ||||||||
| Last Name | van der Wel | ||||||||
| hanke@uga.edu | |||||||||
| Confirm Email | hanke@uga.edu | ||||||||
| Attached Files |  Spy_fasta.meg (18,830 bytes) 2020-06-02 17:07 | ||||||||
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Notes |
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(0004477) gstecher (administrator) 2020-06-09 07:46 |
Hi Hanke, I am writing in response to the bug report you recently submitted regarding the MEGA software. The error you encounter is because the name G.sulphuraria is used twice in the alignment and duplicate names are not allowed. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu |
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Notes |
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Issue History |
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| Date Modified | Username | Field | Change |
| 1969-12-31 17:33 | user19 | Note Added: 0001819 | |
| 1969-12-31 17:33 | user19 | Status | new => acknowledged |
| 1969-12-31 17:33 | user19 | Note Added: 0001822 | |
| 1969-12-31 17:33 | user19 | File Added: TOROSUS_cytb90seq.nex.con | |
| 1969-12-31 17:33 | user19 | File Added: torosus_cytb90seq_edges.phy | |
| 1969-12-31 17:33 | user19 | File Added: torosus_cytb90seq_edges_labels.phy | |
| 1969-12-31 17:33 | user19 | File Added: torosus_cytb90seq_raw.phy | |
| 1969-12-31 17:33 | user19 | Note Added: 0001824 | |
| 1969-12-31 17:33 | user19 | Status | acknowledged => resolved |
| 1969-12-31 17:33 | user19 | Resolution | open => fixed |
| 1969-12-31 17:33 | user19 | Assigned To | => user19 |
| 2020-06-02 17:07 | guest | New Issue | |
| 2020-06-02 17:07 | guest | File Added: Spy_fasta.meg | |
| 2020-06-03 07:43 | gstecher | Note Deleted: 0001819 | |
| 2020-06-03 07:43 | gstecher | Note Deleted: 0001822 | |
| 2020-06-03 07:43 | gstecher | Note Deleted: 0001824 | |
| 2020-06-09 07:44 | gstecher | File Deleted: TOROSUS_cytb90seq.nex.con | |
| 2020-06-09 07:44 | gstecher | File Deleted: torosus_cytb90seq_edges.phy | |
| 2020-06-09 07:44 | gstecher | File Deleted: torosus_cytb90seq_edges_labels.phy | |
| 2020-06-09 07:44 | gstecher | File Deleted: torosus_cytb90seq_raw.phy | |
| 2020-06-09 07:46 | gstecher | Note Added: 0004477 | |
| 2020-06-09 07:46 | gstecher | Status | new => resolved |
| 2020-06-09 07:46 | gstecher | Resolution | open => no change required |
| 2020-06-09 07:46 | gstecher | Assigned To | => gstecher |
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Issue History |
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