0002900: How to get a file containing all bootstrap trees - MantisBT

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ID

Project

Category

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Date Submitted

Last Update

0002900

MEGA

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public

2021-07-16 04:11

2021-08-24 02:51

Reporter

guest

Assigned To

gstecher

Priority

normal

Severity

minor

Reproducibility

have not tried

Status

resolved

Resolution

no change required

Platform

OS

Product Version

MEGA 11 (Graphical Interface version)

Target Version

Fixed in Version

Summary

0002900: How to get a file containing all bootstrap trees

Description

Hi,

I'd like to apply the "Booster" bootstrap method to the MEGAX results.
To be able to use Booster, I need a file containing all bootstrap trees.
But, I cannot find how to get one from MEGAX.
Are there any ways to get a file containing all bootstrap trees?

ICYMI, below are several links for the "Booster" program.
https://www.nature.com/articles/s41586-018-0043-0 [^]
https://github.com/evolbioinfo/booster [^]
https://booster.pasteur.fr/ [^]

Thanks in advance.

Ilnam Kang

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First Name

Ilnam

Last Name

Kang

Email

ikang@inha.ac.kr

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Notes
(0004653) gstecher (administrator) 2021-07-19 07:50	Hi Ilnam, I am writing in response to your question regarding the MEGA software. No, MEGA does not provide a way to get all replicate trees when using the bootstrap test. Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu

Issue History
Date Modified	Username	Field	Change
2021-07-16 04:11	guest	New Issue
2021-07-19 07:50	gstecher	Note Added: 0004653
2021-07-19 07:50	gstecher	Status	new => resolved
2021-07-19 07:50	gstecher	Resolution	open => no change required
2021-07-19 07:50	gstecher	Assigned To	=> gstecher
2021-08-24 02:51	guest	Confirm Email	ikang@inha.ac.kr =>
2021-08-24 02:52	guest	Issue cloned: 0003004

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