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IDProjectCategoryView StatusDate SubmittedLast Update
0003704MEGA[All Projects] Feedbackpublic2022-05-24 14:232023-04-14 18:51
Reporterguest 
Assigned To 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusnewResolutionopen 
PlatformOS 
Product VersionMEGA 11 (Graphical Interface version) 
Target VersionFixed in Version 
Summary0003704: help interpreting selection test - conflicting info
DescriptionI ran a z-test codon test and the results: P "values", 0.00165, 1.000, and 0.0005, for Neutrality, Positive Selection, and Purifying Selection, respectively. The caption of the test says: "The probability of rejecting the null hypothesis of strict-neutrality (dN = dS) (Prob column)". I understand p-value, as the probability of observing a x value higher than the observed given a null hypothesis.
Hope you can help me understand this.
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First NameJuan Pablo
Last NameAguilar Cabezas
Emailja569116@ohio.edu
Confirm Emailja569116@ohio.edu
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-  Notes
(0002454)
user614
1969-12-31 17:33

Hello Jutta,
I am responding to your feature request for bootstrap analysis of phylogenies in MEGA5. This capability is available for all phylogeny inference methods. To perform bootstrap analysis, first select the desired tree making method under the phylogeny menu. Then, on the analysis preferences menu, select ‘bootstrap’ under the test of phylogeny item. Hope this helps!

Best regards,

Glen Stecher
(0006664)
guest (reporter)
2023-04-14 18:51

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- Issue History
Date Modified Username Field Change
1969-12-31 17:33 user614 Note Added: 0002454
1969-12-31 17:33 user614 Status new => resolved
1969-12-31 17:33 user614 Resolution open => no change required
1969-12-31 17:33 user614 Assigned To => user614
1969-12-31 17:33 user614 Tag Attached: how_to
2022-05-24 14:23 guest New Issue
2023-04-14 18:51 guest Note Added: 0006664


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