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ID | Project | Category | View Status | Date Submitted | Last Update |
0004574 | MEGA | [All Projects] Feedback | public | 2023-02-20 04:29 | 2023-04-14 00:44 |
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Reporter | guest | |
Assigned To | | |
Priority | normal | Severity | minor | Reproducibility | have not tried |
Status | new | Resolution | open | |
Platform | | OS | | |
Product Version | | |
Target Version | | Fixed in Version | | |
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Summary | 0004574: Adding Tajima-Nei to DNA model test |
Description | Hello,
I was wondering why there is no Tajima-Nei model in the best DNA model (MEGA X)? As you point out on your website, Tajima-Nei is closer to real-life nucleotide frequencies. But in the best DNA model test we only get these: GeneralTimeReversible; Hasegawa-Kishino-Yano; Tamura-Nei; Tamura 3-p; Kimura 2-p; and J-C.
Meanwhile, we still can apply Tajima-Nei model to e.g. building a phylogenetic tree. But we cannot justify the use of Tajima-Nei if it is not given from the best DNA model test. |
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First Name | Ekaterina |
Last Name | Karabanina |
Email | ekaterina.karabanina@oulu.fi |
Confirm Email | ekaterina.karabanina@oulu.fi |
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