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ID | Project | Category | View Status | Date Submitted | Last Update | ||||||||
0005170 | MEGA | Tree Explorer | public | 2023-06-07 05:04 | 2023-06-07 05:04 | ||||||||
Reporter | guest | ||||||||||||
Assigned To | |||||||||||||
Priority | normal | Severity | minor | Reproducibility | have not tried | ||||||||
Status | new | Resolution | open | ||||||||||
Platform | PC | OS | Windows | ||||||||||
Product Version | MEGA 11 (Graphical Interface version) | ||||||||||||
Target Version | Fixed in Version | ||||||||||||
Summary | 0005170: MEGA11 crashes in Windows11 | ||||||||||||
Description | As soon as I try to do Neighbor-Joining Tree (bootstrap = ON x1000) after MUSCLE alignment, the program crashes and disappear, leaving no warning or error report. | ||||||||||||
Steps To Reproduce | Open the software: Align > Build new alignment > Protein > remove sequence 0 > add sequences (attached below) > Make MUSCLE aligment > export aligment as MEGA > close aligment windows > Phylogeny > COnstruct /test neighbor joining tree > activate bootstrap > set to 500 or whatever > rest by default > Press Ok > CRASH | ||||||||||||
Additional Information | Peptides to align: >MpFER MKITEGRFRLSLLLLLLLISAATLISAADYSPTEKILLNCGGGASNLTDTDNRIWISDVKSKFLSSSSEDSKTSPALTQDPSVPEVPYMTARVFRSPFTYTFPVASGRKFVRLYFYPNSYDGLNATNSLFSVSFGPYTLLKNFSASQTAEALTYAFIIKEFVVNVEGGTLNMTFTPESAPSNAYAFVNGIEVTSMPDMYSSTDGTLTMVGSSGSVTIDNSTALENVYRLNVGGNDISPSADTGLYRSWYDDQPYIFGAGLGIPETADPNMTIKYPTGTPTYVAPVDVYSTARSMGPTAQINLNYNLTWIFSIDSGFTYLVRLHFCEVSSNITKINQRVFTIYLNNQTAEPEADVIAWTSSNGVPFHKDYVVNPPEGNGQQDLWLALHPNPVNKPEYYDSLLNGVEIFKMNTSDGNLAGTNPIPGPQVTADPSKVLRPTTRKSKSNTAIIAGAASGAVVLALIIGFCVFGAYRRRKRGDYQPASDATSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEWAPYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLEFALQLQESAEENGKGVCGDMDMDEIKYDDGNCKGKNDKSSDVYEGNVTDSRSSGIDMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR >AtANXUR1 MSGKTRILFFLTCLSFLLVFPTRSNGQDLALSCGTSEASADQDKKKWEPDTKFLKTGNSIHATATYQDPSLLSTVPYMTARIFTAPATYEIPIKGDKRHLLRLYFYPSTYTGLNISNSYFTVEANDVTLLSNFSAAITCQALTQAYLVKEYSLAPTDKDVLSIKFTPSDKYRDAFAFINGIEVIQMPELFDTAALVGFTDQTMDAKTANLQSMFRLNVGGQDIPGSQDSGGLTRTWYNDAPYIFSAGLGVTLQASNNFRINYQNMPVSIAPADIYKTARSQGPNGDINLKSNLTWMFQIDKNFTYILRLHFCEFQLSKINQKVFNIYINNRTAQADTTPADIIGWTGEKGIPMYKDYAIYVDANNGGEEITLQMTPSTFGQPEYYDSSLNGLEIFKMDTMKNLAGPNPEPSPMQAEEEVKKEFKNEKRHAFIIGSAGGVLAVLIGALCFTAYKKKQGYQGGDSHTSSWLPIYGNSTTSGTKSTISGKSNNGSHLSNLAAGLCRRFSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLEFALQLQETADGTRHRTPNNGGSSEDLGRGGMAVNVAGRDDVSDLSSEDNTEIFSQIVNPKGR >AtTHE1 MVFTKSLLVLLWFLSCYTTTTSSALFNPPDNYLISCGSSQNITFQNRIFVPDSLHSSLVLKIGNSSVATSTTSNNSTNSIYQTARVFSSLASYRFKITSLGRHWIRLHFSPINNSTWNLTSASITVVTEDFVLLNNFSFNNFNGSYIFKEYTVNVTSEFLTLSFIPSNNSVVFVNAIEVVSVPDNLIPDQALALNPSTPFSGLSLLAFETVYRLNMGGPLLTSQNDTLGRQWDNDAEYLHVNSSVLVVTANPSSIKYSPSVTQETAPNMVYATADTMGDANVASPSFNVTWVLPVDPDFRYFVRVHFCDIVSQALNTLVFNLYVNDDLALGSLDLSTLTNGLKVPYFKDFISNGSVESSGVLTVSVGPDSQADITNATMNGLEVLKISNEAKSLSGVSSVKSLLPGGSGSKSKKKAVIIGSLVGAVTLILLIAVCCYCCLVASRKQRSTSPQEGGNGHPWLPLPLYGLSQTLTKSTASHKSATASCISLASTHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIPGIPMAPMEPFDNSMSIIDRGGVNSGTGTDDDAEDATTSAVFSQLVHPRGR >AtFER MKITEGRFRLSLLLLLLLISAATLISAADYSPTEKILLNCGGGASNLTDTDNRIWISDVKSKFLSSSSEDSKTSPALTQDPSVPEVPYMTARVFRSPFTYTFPVASGRKFVRLYFYPNSYDGLNATNSLFSVSFGPYTLLKNFSASQTAEALTYAFIIKEFVVNVEGGTLNMTFTPESAPSNAYAFVNGIEVTSMPDMYSSTDGTLTMVGSSGSVTIDNSTALENVYRLNVGGNDISPSADTGLYRSWYDDQPYIFGAGLGIPETADPNMTIKYPTGTPTYVAPVDVYSTARSMGPTAQINLNYNLTWIFSIDSGFTYLVRLHFCEVSSNITKINQRVFTIYLNNQTAEPEADVIAWTSSNGVPFHKDYVVNPPEGNGQQDLWLALHPNPVNKPEYYDSLLNGVEIFKMNTSDGNLAGTNPIPGPQVTADPSKVLRPTTRKSKSNTAIIAGAASGAVVLALIIGFCVFGAYRRRKRGDYQPASDATSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEWAPYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLEFALQLQESAEENGKGVCGDMDMDEIKYDDGNCKGKNDKSSDVYEGNVTDSRSSGIDMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR >PaRALF1 LLRRVRYYISYGALSANRVPCRPRSGRSYYTRNCYRATGPVRPYHRSCTAITRCRRYTS >PaRALF2 LLRRVRYYISYGALSANRVPCRPRSGRSYYTRNCYRATGPVRPYRRSCTAITRCRRYTT >PaRALF3 LLRRIHYYISYGALAANHVPCRPRSGRSYYTRNCYSATGPVRPYHRSCTAITRCRRYTS >PaRALF4 RLLRQIRYYISYGALIANRIPCPPRSGRSYYTRNYYRATEPVKPYHRSCTAITRCLRDTI >PaRALF5 LLRRVRYYISYSALYADSVNCPPRSGRSYYTRDCFRATGPVRPYRRSCTTITRCRRYTD >PaRALF6 LLRRVRYYISYGALAANRVPCRPRSGRMQLVAPLVLLLVSLFCMADSFNDQELTVTSDWLGGVASYEFDSFAGQICDGTLGDCNDDNGEFMMDTEAPGR >PaRALF6.2 LLRRVRYDISYGALAANRVPCRPRSGRSYYTRNCYRATGPVKPYRRSCTAIT >PaRALF7 LLRRVRYYISYGALAANRVPCRPRSGRSYYTRNCYAATGPRLVREIAHDFKTDLRFQSSTVAALQKVAEAYLVGLFKDTNMCAIHAKRVTIMPKDIQLTRHIRGERA >PaRALF8 LWWRRTYISYDALSRDRVPCSKRGTSYYNCGRTSQANPYNRGCTQITRCARDTG >PaRALF9 SIIICHGDECGLYDENDNEGVMVYINTRRKMTESRTVQHISYGALAADNVPCPITGQSYYYCNTSDPNVNPYTRACTAITRCERDTN >PaRALF10 QVSYGLQCDPNAEECDLVQAEATVDSVYTFPEHSEEGEGEVSSRRRTMSNETQPVPYISYAALSANNVPCPISGQSYYHCNYSDSAVNPYTRSCTAIARCERDVN >PpRALF1.1 QAPFAAVAPSPFTGFPPQEAPAFAGSGGPVLYITYGALRANRSPCPAGAGRSYYTPNCGAASGPPNPYSRGCSYITRCARV >PpRALF2.1 RRLLAARRRSYISYGALNRNRSPCPARSGRSYYTPNCNSNAGPARPYTRGCLRITRCQRV >PpRALF3.1 EQQLGFSPGAIYPDAHRVLAAAPNYYISYGSLNADRAPCPASSSGRSYYTTNCQSSGTPQPYVRSCSQITRCARG >AmTrRALF1 RRSLYWRIVHYYISYGALSANRIPCPPRSGRSYYTHNCYKARGPVRPYHRGCNAITGCSRDVS >AmTrRALF2 RRILADAENKYISYRALKKDSVPCSKAGVSYYNCGGTGPPNPYSRSCTTISGCARDTG >AmTrRALF3 RRVVFELEQYISYGALMADRVPCPPGCGRPYYTKDCYRARGSVRPYDRGCSVITGCERYTG >AmTrRALF4 RRLLGGAKRYISYGALKKDRVPCNHRGASYYNCKRTSRANPYRRGCSAITRCARILK >AmTrRALF5 RRILATDQYISYNALKKNIVPCSKKGQSYYNCRAGGQANPYSRGCSAITRCARDTS >AmTrRALF6 RRVLGAARQYLSYRALLKNRVPCNHRGNSYYNCKPRARANPYRRGCSIITRCARILK >SmRALF1 SSSSPRDPLLGLLQAGGRSIQYYQEPPKKKQQHIHYISYGALSADRVPCAPMSGRSYYTPNCVAAKGPPDCYARRCSTITRCARDS >SmRALF2 RRLLQQQQKQYISYGSLQANRVPCPPGSGRSYYTNNCNRATGAANPTQRGCSTITRCQ >MpRALF1 RRILATKKKSNTKSSGYFISYSALSASRTSCPPRSGRSYYTRNCNSASGPVRPYSRGCSTISRCARDSG >MpRALF2 PASPAAGGYYISYGALTADNVNCPPQSGRSYYTTNCNSASGPVRPYERTCSTITRCARDEV >MpRALF3 RRMLAASGYYVGYGALTANRVPCPPQSGRSYYTPGCSTASGPVRPYTRGCSTITRCARDG >AtRALF1 RRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS >AtRALF2 QKVIGYPAIGRDGARGCSPKDPSCPQQPEKPYKRGCEKITRCERDRRKQAHLRNPRKVLDVVAVMAKAKQLY >AtRALF3 RKEIGYPKQRFGEDRTNPYEEITPPLIGGCDPKNPQTCLPKQPANPYRRGCLKITRCQRDV >AtRALF4 RRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRYAR >AtRALF5 KRYIEYPPWQKHPCNPRFPTPDCYKRTPANPYRRGCTCISRCRRDCGGLSTWKKLLDTILKIPV >AtRALF6 QTYINYNGMKGDIIPGCSSKNPKECVKIPAYSYNRGCEISTRCQRQQHSSSS >AtRALF7 IKQINYKDLIKDTIPGCTSKNPKECVKVPANTYHRGCEISTRCHREQHSSSG >AtRALF8 SVRYITYPAIDRGDHAVHCDKAHPNTCKKKQANPYRRGCGVLEGCHRETGPKPT >AtRALF9 TRYITYPAIDRGDHAVHCDKAHPNTCKKKEANPYQRGCEKINRCRGG >AtRALF10 VPVESRRKHLDYGVITKCAGPNPPPGCYPPGAQQKNPTPANEYRRGCSKITRCKRD >AtRALF11 EPVESRNYIEYGAINKCAGPNPPPGCNPPGAEQKNPTPVNEYSRGCSKIHRCRRD >AtRALF12 EPVESRNYIEYGAINKCAGPNPPPGCNPPGTEQKNPTPVNEYSRGCSKIHRCRRD >AtRALF13 EPVESRNYIEYGAINKCAGPNPPPGCNPPGAEQKNPNPVNEYSRGCSKIHRCRRD >AtRALF14 RRILQASRYISYEALKKNLPDNRRGEPDQRDNPYRRSCDVHSHCYRFTN >AtRALF15 TRYISYRGMNHGDHAIHCDKAHPNTCKKQVANPYRRGCGTIERCRRDTGRK >AtRALF16 RTLGYGSIKGDRIPACGYKNPNSCVKQPVNHYHRGCEKITRCARDAARYTESFNVDDDESPIINLH >AtRALF17 NSIGAPAMREDLPKGCAPGSSAGCKMQPANPYKPGCEASQRCRGG >AtRALF18 HRILQAKRFIDYEALKKNLPAKPDGKPDKPDNKYRRGCSAATGCYRFTN >AtRALF19 RRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQTS >AtRALF20 KTIGNPAMREDEPKGCPPGSPASCKMQPANPYKPGCEASQRCRGT >AtRALF21 KVIGYPGLKPDLPCDHHRYPSACAPSEQPVNPYRRGCSKIHRCRRDSPPAPISRKMLIRGQLIYNNAYNAYIQYP >AtRALF22 RRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCRR >AtRALF23 RRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCRRS >AtRALF24 RRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTNDIKT >AtRALF25 NDNKRKYLLLDPCLRPNAPPGCHRQPYKPRTPVNVYSRGCTTINRCRRVQNP >AtRALF26 RKGRKYLNPGVLDRCRGPNPPAGCHPHNSHHKPRVPVHNYSRGCSRITRCRRDA >AtRALF27 RRILQQRKYLSYKTLQKQPTCDGRIAGNCIGTVNPKGATCTYYQRCKRAA >AtRALF28 NEIGYPGMGRGDRQPGCDHGNCPPDQPANPYHRGCEKSKRCRGPDPPALPRKMI >AtRALF29 KRYIEYPIRLDLGKGCDPRFPTAACYKRTPANPYRRPCTTANRCRRSTSSTRVPSLKTFVEIPPM >AtRALF30 AGGGKFLNPGVLDPCLRPNPPPECQAPGSAGKPRERVNEYKVGCSKLTRCDRVG >AtRALF31 RRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYSRGCDTITRCARDTNDINT >AtRALF32 QRLTEEQAHKLSYGALRRNQPACDGGKRGESYSTQCLPPPSNPYSRGCSKHYRCGRDS >AtRALF33 RRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR >AtRALF34 RRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSITRCRR >AtRALF35 RYIKYRAIAKDRVPDCTQDPKNCVRVPVNQYHLPPGCQNTTHCYREKYHI >AtRALF36 DTINREQVISYESMRVNHAWGCSQKYPQFCQKTRANPYTKPPPKNSEAS >AtRALF37 EDVISYEVLLQDHAWGCSPKFPRLSCLKQKANP | ||||||||||||
Tags | No tags attached. | ||||||||||||
Attach Tags | (Separate by ",") | ||||||||||||
First Name | Alejandro | ||||||||||||
Last Name | Giraldo Fonseca | ||||||||||||
alejandro.giraldo@botinst.uzh.ch | |||||||||||||
Confirm Email | alejandro.giraldo@botinst.uzh.ch | ||||||||||||
Attached Files | |||||||||||||
Issue History | |||
Date Modified | Username | Field | Change |
1969-12-31 17:33 | user614 | Status | new => closed |
1969-12-31 17:33 | user614 | Resolution | open => fixed |
2023-06-07 05:04 | guest | New Issue |
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