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| ID | Project | Category | View Status | Date Submitted | Last Update |
| 0000703 | MEGA | [All Projects] Feedback | public | 2018-03-15 08:39 | 2018-03-15 08:39 |
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| Reporter | guest | |
| Assigned To | | |
| Priority | normal | Severity | minor | Reproducibility | have not tried |
| Status | new | Resolution | open | |
| Platform | | OS | | |
| Product Version | | |
| Target Version | | Fixed in Version | | |
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| Summary | 0000703: Issues with MEGA7 and dN/dS |
| Description | Hello,
I made an alignment and fed it into Hyphy. However, the output does not record the correct number of codons I put in. I understand there may be gaps in the sequence, but if it doesn't account for certain gaps, then the codon number is wrong and I can not correlate the dN/dS value to a particular codon. This is especially annoying when I am trying to compare dN/dS values to various sequence lengths of one alignment. I can not say which codons are to what value.
any suggestions?
Jon |
| Tags | No tags attached. |
| Attach Tags | (Separate by ",")
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| First Name | Jonathan |
| Last Name | Schulz |
| Email | jonathan.schulz@nih.gov |
| Confirm Email | jonathan.schulz@nih.gov |
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| Attached Files | |
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