0000513: Large input file size

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0000513

MEGA

Text Editor

public

2017-08-02 13:27

2017-09-19 07:24

Reporter

guest

Assigned To

gstecher

Priority

normal

Severity

minor

Reproducibility

have not tried

Status

resolved

Resolution

no change required

Platform

Mac

OS X

Product Version

MEGA 11 (Graphical Interface version)

Target Version

Fixed in Version

Summary

0000513: Large input file size

Description

Dear MEGA7,
I want to use mega7 to reconstruct a NJ tree of my subject genomes. I have 476 sequences, with each sequence having 930,000 bases in length. So the total size of my input file is about 450 Mb.

You know, when I used the MEGA-GUI version, I got the error information "The file you are trying to open is too large for MEGAs text editor to handle."

So I tried the CC-version instead, but it said "Error: Line Too Long (in line 4)".

Thus, except for reducing my file size, how can I do now?

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First Name

Qing

Last Name

Liu

qingpol@uci.edu

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qingpol@uci.edu

Attached Files

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has duplicate

0000512

resolved

gstecher

Large input file size

Notes
(0003843) gstecher (administrator) 2017-08-16 08:08	Hi Qing, I am writing in response to your question regarding the MEGA software. What format is you alignment file in? With most formats, you add line endings (typically every 80 characters) to your sequences so that they are distributed over multiple lines and lines are not very long. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu

(0003848) gstecher (administrator) 2017-09-19 07:24	no response from user

Issue History
Date Modified	Username	Field	Change
2017-08-02 13:27	guest	New Issue
2017-08-16 08:05	gstecher	Note Deleted: 0000393
2017-08-16 08:05	gstecher	Note Deleted: 0000442
2017-08-16 08:05	gstecher	Note Deleted: 0000423
2017-08-16 08:08	gstecher	Assigned To	=> gstecher
2017-08-16 08:08	gstecher	Status	new => assigned
2017-08-16 08:08	gstecher	Note Added: 0003843
2017-08-16 08:08	gstecher	Relationship added	has duplicate 0000512
2017-09-19 07:24	gstecher	Note Added: 0003848
2017-09-19 07:24	gstecher	Status	assigned => resolved
2017-09-19 07:24	gstecher	Resolution	open => no change required