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| ID | Project | Category | View Status | Date Submitted | Last Update | ||||
| 0001421 | MEGA | [All Projects] Feedback | public | 2019-09-17 03:27 | 2019-09-17 11:29 | ||||
| Reporter | guest | ||||||||
| Assigned To | gstecher | ||||||||
| Priority | normal | Severity | minor | Reproducibility | have not tried | ||||
| Status | resolved | Resolution | no change required | ||||||
| Platform | OS | ||||||||
| Product Version | MEGA-CC 11 (command line version) | ||||||||
| Target Version | Fixed in Version | ||||||||
| Summary | 0001421: decimal points of substitution matrix | ||||||||
| Description | I want to know more detailed values obtained by "Estimate Substitution Matrix". For example, output like C => G : 0.01, A => 0.00 does not tell us useful information, but output like C => G : 0.01, A => 0.004 may have significant meanings when comparing those substitution rates. Is there any way to know values after the third decimal points ? If so, please tell me the solution, but if not, I am looking forward to the improved version. | ||||||||
| Tags | No tags attached. | ||||||||
| Attach Tags | (Separate by ",") | ||||||||
| First Name | Shinya | ||||||||
| Last Name | Yoshida | ||||||||
| yoshida@ut-biomet.org | |||||||||
| Confirm Email | yoshida@ut-biomet.org | ||||||||
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(0004303) gstecher (administrator) 2019-09-17 11:29 |
Hi Shinya, I am writing in response to your question regarding the MEGA software. When viewing a substitution matrix in MEGA's caption viewer, there is an option to save the results to a spreadsheet file which will give greater precision. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu |
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Issue History |
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| Date Modified | Username | Field | Change |
| 2019-09-17 03:27 | guest | New Issue | |
| 2019-09-17 11:29 | gstecher | Note Added: 0004303 | |
| 2019-09-17 11:29 | gstecher | Status | new => resolved |
| 2019-09-17 11:29 | gstecher | Resolution | open => no change required |
| 2019-09-17 11:29 | gstecher | Assigned To | => gstecher |
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Issue History |
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