MantisBT
My View | View Issues | Report Issue | Change Log | Roadmap | My Account
  

View Issue Details [ Jump to Notes ] [ Issue History ] [ Print ]
IDProjectCategoryView StatusDate SubmittedLast Update
0001756MEGA[All Projects] Feedbackpublic2020-02-05 09:252020-02-07 07:29
Reporterguest 
Assigned Togstecher 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusresolvedResolutionno change required 
PlatformOS 
Product Version 
Target VersionFixed in Version 
Summary0001756: What is the algorithm used to calculate conservation
DescriptionCould the website please be updated with information explaining what algorithm is used in the 'Sequence Data Explorer' to identify and highlight conserved regions in a protein multiple sequence alignment?
TagsNo tags attached.
Attach Tags (Separate by ",")
First NameClair
Last NameGyesi
Emailmameakosua@hotmail.co.uk
Confirm Emailmameakosua@hotmail.co.uk
Attached Files

- Relationships

-  Notes
(0004404)
gstecher (administrator)
2020-02-07 07:29

 Hi Clair,

I am writing in response to your question regarding the MEGA software. There is no algorithm that is used to highlight conserved sites in the Sequence Data Explorer. A given site is either conserved (constant) or it is not.

--
Best regards,
Glen Stecher
Institute for Genomics and Evolutionary Medicine
igem.temple.edu

- Issue History
Date Modified Username Field Change
2020-02-05 09:25 guest New Issue
2020-02-07 07:29 gstecher Note Added: 0004404
2020-02-07 07:29 gstecher Status new => resolved
2020-02-07 07:29 gstecher Resolution open => no change required
2020-02-07 07:29 gstecher Assigned To => gstecher

Copyright © 2000 - 2025 MantisBT Team
Powered by Mantis Bugtracker