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IDProjectCategoryView StatusDate SubmittedLast Update
0001984MEGATimetree Wizardpublic2020-05-14 18:222023-04-14 19:11
Reporterguest 
Assigned To 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusnewResolutionopen 
PlatformMacOSOS X 
Product VersionMEGA 11 (Graphical Interface version) 
Target VersionFixed in Version 
Summary0001984: Unexpected application quit/closure in middle of clock tree analysis
DescriptionMEGA X application (macOS Mojave 10.14) unexpectedly quits/closes in the middle of analysis, whether it is forming a tree or performing a clock analysis. Any 'heavy-duty' analysis in MEGA X shuts down the application unexpectedly, so I cannot perform any complex analyses on MEGA.
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First NameShamitraa
Last NameRamanan
Emailshamiramanan@gmail.com
Confirm Emailshamiramanan@gmail.com
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-  Notes
(0001907)
user19
1969-12-31 17:33

 This appears to just be an out of memory error. We really need to fix this for MP trees.
(0002537)
user614
1969-12-31 17:33

 We need to update the Mega source code to catch the out of memory error and end the calculation gracefully. This shouldn't be too difficult. We should be able to accomplish this by putting a try/except/finally around the memory allocation code and if we get an eoutofmemory error we can end the calculation and inform the user that they will have to use an inference method that is less memory-intensive.
(0002632)
user614
1969-12-31 17:33

 Added code to trap out of memory errors when running parsimony based analyses and handle them gracefully.
(0004870)
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(0006912)
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- Issue History
Date Modified Username Field Change
1969-12-31 17:33 user19 Note Added: 0001907
1969-12-31 17:33 user614 Priority normal => high
1969-12-31 17:33 user614 Product Version 5.0 =>
1969-12-31 17:33 user614 Note Added: 0002537
1969-12-31 17:33 user614 Category MEGA Main => Calculation Error
1969-12-31 17:33 user614 Note Added: 0002632
1969-12-31 17:33 user614 Status new => resolved
1969-12-31 17:33 user614 Resolution open => fixed
1969-12-31 17:33 user614 Assigned To => user614
2020-05-14 18:22 guest New Issue
2022-03-08 07:04 guest Note Added: 0004870
2023-04-14 19:11 guest Note Added: 0006912

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