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ID | Project | Category | View Status | Date Submitted | Last Update | ||||
0003423 | MEGA | [All Projects] Feedback | public | 2022-02-02 10:39 | 2022-02-03 09:53 | ||||
Reporter | guest | ||||||||
Assigned To | gstecher | ||||||||
Priority | normal | Severity | minor | Reproducibility | have not tried | ||||
Status | resolved | Resolution | no change required | ||||||
Platform | OS | ||||||||
Product Version | |||||||||
Target Version | Fixed in Version | ||||||||
Summary | 0003423: distance matrices | ||||||||
Description | Dear Sir or Madam, I have tried to obtain distance matrices on sequence data (aligment) after grouping them into populations. I succeeded to obtain only one, while I was expecting to obtain many distance matrices because of choosing the bootstrap option. Is it possible to print the bootstrapped matrices? I would like to use it for Barrier software. Could you recommend a way to calculate such pop-based bootstrap matrices in other software it is not possible in Mega? with best wishes, Hanna. | ||||||||
Tags | No tags attached. | ||||||||
Attach Tags | (Separate by ",") | ||||||||
First Name | Hanna | ||||||||
Last Name | Panagiotopoulou | ||||||||
hanna.panagiotopoulou@gmail.com | |||||||||
Confirm Email | hanna.panagiotopoulou@gmail.com | ||||||||
Attached Files | |||||||||
Notes | |
(0004794) gstecher (administrator) 2022-02-03 09:53 |
Hi Hanna, I am writing in response to your recent question regarding the MEGA software. No, MEGA does not export matrices when using the bootstrap option for distance estimation. The bootstrap option is only provided for variance estimation. Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu |
Issue History | |||
Date Modified | Username | Field | Change |
2022-02-02 10:39 | guest | New Issue | |
2022-02-03 09:53 | gstecher | Note Added: 0004794 | |
2022-02-03 09:53 | gstecher | Status | new => resolved |
2022-02-03 09:53 | gstecher | Resolution | open => no change required |
2022-02-03 09:53 | gstecher | Assigned To | => gstecher |
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