0003610: Problems with sequences explorer

(0002403)
user614
1969-12-31 17:33

Problem was that the molecular_clock.htm template was being loaded instead of the ml_tree.htm template. Fixed it so that the molecular_clock.htm caption is displayed by calling showClockTreeResults()

(0002404)
user614
1969-12-31 17:33

Hi Yoshihiro,
I am writing in response to the bug report you submitted regarding crash when analyzing a user tree with molecular clock assumption in MEGA. Thanks for reporting this bug. We have resolved the problem and the patch will be included in the next release of MEGA.

Best regards,

Glen Stecher

(0005591)
user614
1969-12-31 17:33

Hello Jorg,
I am responding to your question regarding how MEGA reports p-values for the molecular clock test. Indeed this is done in a confusing way. I think that a better way to express this result is probably to just report the p-value as it is (i.e. P = 5.47121430322315E-10) instead of using the greater than or less than symbols. I will confer with my colleagues on the best way to fix this. Any way, we will correct the problem so that the next release of MEGA does not cause this confusion. Thanks for reporting this issue!

Best regards,

Glen Stecher

(0005592)
user614
1969-12-31 17:33

Changed the template to report the p-value as P=some value. This is how any other program would report it.

(0005593)
guest (reporter) [ private ]
2022-04-16 11:47

1

(0005594)
guest (reporter)
2022-04-16 14:17

1

(0006699)
guest (reporter)
2023-04-14 18:54

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Issue History
Date Modified	Username	Field	Change
2022-04-16 14:49	guest	New Issue
2022-04-16 14:49	guest	Issue generated from: 0003607
2023-04-14 18:54	guest	Note Added: 0006699

Notes
(0002403) user614 1969-12-31 17:33	Problem was that the molecular_clock.htm template was being loaded instead of the ml_tree.htm template. Fixed it so that the molecular_clock.htm caption is displayed by calling showClockTreeResults()

(0002404) user614 1969-12-31 17:33	Hi Yoshihiro, I am writing in response to the bug report you submitted regarding crash when analyzing a user tree with molecular clock assumption in MEGA. Thanks for reporting this bug. We have resolved the problem and the patch will be included in the next release of MEGA. Best regards, Glen Stecher

(0005591) user614 1969-12-31 17:33	Hello Jorg, I am responding to your question regarding how MEGA reports p-values for the molecular clock test. Indeed this is done in a confusing way. I think that a better way to express this result is probably to just report the p-value as it is (i.e. P = 5.47121430322315E-10) instead of using the greater than or less than symbols. I will confer with my colleagues on the best way to fix this. Any way, we will correct the problem so that the next release of MEGA does not cause this confusion. Thanks for reporting this issue! Best regards, Glen Stecher

(0005592) user614 1969-12-31 17:33	Changed the template to report the p-value as P=some value. This is how any other program would report it.

(0005593) guest (reporter) [ private ] 2022-04-16 11:47	1

(0005594) guest (reporter) 2022-04-16 14:17	1

(0006699) guest (reporter) 2023-04-14 18:54	https://www.estoolcarbide.com/product/dnmg-carbide-inserts-for-cast-iron-turning-inserts-p-1183/ [^] [DNMG Cast Iron Inserts] http://salegoods.blog.jp/ [^] [http://salegoods.blog.jp/ [^]] https://douglasvio.exblog.jp/ [^] [carbide wear rods] http://allbest.blog.jp/ [^] [http://allbest.blog.jp/ [^]] https://keithwalte.exblog.jp/ [^] [buy tungsten carbide rods] http://good-time.blog.jp/ [^] [http://good-time.blog.jp/ [^]] https://andyclaren.exblog.jp/ [^] [turning inserts price] https://lorindunca.exblog.jp/ [^] [carbide rod canada] https://jacobupton.exblog.jp/ [^] [threading insert]

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