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ID | Project | Category | View Status | Date Submitted | Last Update | ||||
0000368 | MEGA | [All Projects] Feedback | public | 2017-01-24 16:47 | 2017-01-27 12:59 | ||||
Reporter | guest | ||||||||
Assigned To | gstecher | ||||||||
Priority | normal | Severity | minor | Reproducibility | have not tried | ||||
Status | resolved | Resolution | not fixable | ||||||
Platform | OS | ||||||||
Product Version | |||||||||
Target Version | Fixed in Version | ||||||||
Summary | 0000368: Help for computer reporting that lack of enough memory. | ||||||||
Description | Mega is powerful tool to alignment and built the NJ tree. But I was confused that the computer always reported the error of lacking of enough memory. I found that the computer storage space is not the problem, because my computer has a 12G memory, and in the process of continuous monitoring found that the computer RAM utilization has been below 40%, even when the error reported is not more than 50%. Also I increase the "MAX Memory in MB" in the MEGA muscle-Applink option, but it do not work. | ||||||||
Tags | No tags attached. | ||||||||
Attach Tags | (Separate by ",") | ||||||||
First Name | jj | ||||||||
Last Name | wu | ||||||||
seawjj@aliyun.com | |||||||||
Confirm Email | seawjj@aliyun.com | ||||||||
Attached Files | |||||||||
Notes | |
(0003747) gstecher (administrator) 2017-01-27 12:59 |
Hi JJ, I am writing in response to your question regarding the MEGA software. The MUSCLE applink in MEGA is a 32-bit version so it can only address a limited amount of memory. If you are aligning a large amount of data, you might want to try using MAFFT or some other software. -- Best regards, Glen Stecher Institute for Genomics and Evolutionary Medicine igem.temple.edu |
Issue History | |||
Date Modified | Username | Field | Change |
2017-01-24 16:47 | guest | New Issue | |
2017-01-27 12:59 | gstecher | Note Added: 0003747 | |
2017-01-27 12:59 | gstecher | Status | new => resolved |
2017-01-27 12:59 | gstecher | Resolution | open => not fixable |
2017-01-27 12:59 | gstecher | Assigned To | => gstecher |
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